![]() ![]() The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. This bundle collect the standard GNU build tools: Autoconf, Automake and libtoolīEDTools: a powerful toolset for genome arithmetic. ![]() Autoconf creates a configuration script for a package from a template file that lists the operating system features that the package can use, in the form of M4 macro calls.Īutomake: GNU Standards-compliant Makefile generator These scripts can adapt the packages to many kinds of UNIX-like systems without manual user intervention. The Aspera CLI is for users and organizations who want to automate their transfer workflows.Īutoconf is an extensible package of M4 macros that produce shell scripts to automatically configure software source code packages. IBM Aspera Command-Line Interface (the Aspera CLI) is a collection of Aspera tools for performing high-speed, secure data transfers from the command line. PyArrow Python bindings)), a cross-language development platform for in-memory data. Integer, floating point and complex numbers are supported, as well as a subset of trigonometric and statistics functions.Īpache Arrow (incl. Arm Performance Reports runs transparently on optimized production-ready codes by adding a single command to your scripts, and provides the most effective way to characterize and understand the performance of HPC application runs.Īrmadillo is an open-source C++ linear algebra library (matrix maths) aiming towards a good balance between speed and ease of use. Arm Forge combines an industry-leading debugger, Arm DDT, and an out-of-the-box-ready profiler, Arm MAP.Īrm Performance Reports - a low-overhead tool that produces one-page text and HTML reports summarizing and characterizing both scalar and MPI application performance. Forge is designed to handle the complex software projects - including parallel, multiprocess and multithreaded code. The industry standard development package for C, C++ and Fortran high performance code on Linux. Vectorization Optimization and Thread Prototyping - Vectorize & thread code or performance “dies” - Easy workflow + data + tips = faster code faster - Prioritize, Prototype & Predict performance gainīuilt to complement the rich, open source Python community, the Anaconda platform provides an enterprise-ready data analytics platform that empowers companies to adopt a modern open data science analytics architecture. Using the ATK interfaces, accessibility tools have full access to view and control running applications. ASE uses it automatically when installed.ĪTK provides the set of accessibility interfaces that are implemented by other toolkits and applications. From version 3.20.1 we also include the ase-ext package, it contains optional reimplementations in C of functions in ASE. We believe that every product is a promise of something greater.ĪMD Optimized C/C++ & Fortran compilers (AOCC) based on LLVM 12.0ĪSE is a python package providing an open source Atomic Simulation Environment in the Python scripting language. HPC Resource Allocations for Research Projectįinite Element Analysis software for modeling, visualization and best-in-class implicit and explicit dynamics FEA.ĪBINIT is a package whose main program allows one to find the total energy, charge density and electronic structure of systems made of electrons and nuclei (molecules and periodic solids) within Density Functional Theory (DFT), using pseudopotentials and a planewave or wavelet basis.Īssembly By Short Sequences - a de novo, parallel, paired-end sequence assemblerĪCTC converts independent triangles into triangle strips or fans.ĪNSYS simulation software enables organizations to confidently predict how their products will operate in the real world. ![]()
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